singlepp
A C++ library for cell type classification
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singlepp Directory Reference

Files

 choose_classic_markers.hpp
 Classic method for choosing markers.
 
 classify_integrated.hpp
 Integrate classifications from multiple references.
 
 classify_single.hpp
 Classify cells in a test dataset based a single reference.
 
 defs.hpp
 Common definitions for singlepp.
 
 Intersection.hpp
 Create an intersection of genes.
 
 Markers.hpp
 Define the Markers typedef.
 
 singlepp.hpp
 Umbrella header for the singlepp library.
 
 train_integrated.hpp
 Prepare for integrated classification across references.
 
 train_single.hpp
 Train a classifier from a single reference.