train_single.hpp File Reference

Train a classifier from a single reference. More...

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Classes
struct	singlepp::TrainSingleOptions< Index_, Float_, Matrix_ >
	Options for train_single() and friends. More...
class	singlepp::TrainedSingle< Index_, Float_ >
	Classifier trained from a single reference. More...
class	singlepp::TrainedSingleIntersect< Index_, Float_ >
	Classifier built from an intersection of genes. More...

Namespaces
namespace	singlepp
	Cell type classification using the SingleR algorithm in C++.

Functions
template<typename Value_ , typename Index_ , typename Label_ , typename Float_ , class Matrix_ >
TrainedSingle< Index_, Float_ >	singlepp::train_single (const tatami::Matrix< Value_, Index_ > &ref, const Label_ *labels, Markers< Index_ > markers, const TrainSingleOptions< Index_, Float_, Matrix_ > &options)
template<typename Index_ , typename Value_ , typename Label_ , typename Float_ >
TrainedSingleIntersect< Index_, Float_ >	singlepp::train_single_intersect (Index_ test_nrow, const Intersection< Index_ > &intersection, const tatami::Matrix< Value_, Index_ > &ref, const Label_ *labels, Markers< Index_ > markers, const TrainSingleOptions< Index_, Float_ > &options)
template<typename Index_ , typename Id_ , typename Value_ , typename Label_ , typename Float_ , class Matrix_ >
TrainedSingleIntersect< Index_, Float_ >	singlepp::train_single_intersect (Index_ test_nrow, const Id_ *test_id, const tatami::Matrix< Value_, Index_ > &ref, const Id_ *ref_id, const Label_ *labels, Markers< Index_ > markers, const TrainSingleOptions< Index_, Float_, Matrix_ > &options)

Detailed Description

Train a classifier from a single reference.