singlepp
A C++ library for cell type classification
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Classes | Namespaces | Functions
classify_integrated.hpp File Reference

Integrate classifications from multiple references. More...

Go to the source code of this file.

Classes

struct  singlepp::ClassifyIntegratedOptions< Float_ >
 Options for classify_integrated(). More...
 
struct  singlepp::ClassifyIntegratedBuffers< RefLabel_, Float_ >
 Output buffers for classify_single(). More...
 
struct  singlepp::ClassifyIntegratedResults< RefLabel_, Float_ >
 Results of classify_integrated(). More...
 

Namespaces

namespace  singlepp
 Cell type classification using the SingleR algorithm in C++.
 

Functions

template<typename Value_ , typename Index_ , typename Label_ , typename RefLabel_ , typename Float_ >
void singlepp::classify_integrated (const tatami::Matrix< Value_, Index_ > &test, const std::vector< const Label_ * > &assigned, const TrainedIntegrated< Index_ > &trained, ClassifyIntegratedBuffers< RefLabel_, Float_ > &buffers, const ClassifyIntegratedOptions< Float_ > &options)
 Integrate classifications from multiple references.
 
template<typename RefLabel_ = DefaultRefLabel, typename Value_ , typename Index_ , typename Label_ , typename Float_ >
ClassifyIntegratedResults< RefLabel_, Float_singlepp::classify_integrated (const tatami::Matrix< Value_, Index_ > &test, const std::vector< const Label_ * > &assigned, const TrainedIntegrated< Index_ > &trained, const ClassifyIntegratedOptions< Float_ > &options)
 

Detailed Description

Integrate classifications from multiple references.