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singlepp
A C++ library for cell type classification
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Options for classify_integrated().
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#include <classify_integrated.hpp>
Public Attributes | |
| Float_ | quantile = 0.8 |
| Float_ | fine_tune_threshold = 0.05 |
| bool | fine_tune = true |
| int | num_threads = 1 |
Options for classify_integrated().
| Float_ | Floating-point type for the correlations and scores. |
| bool singlepp::ClassifyIntegratedOptions< Float_ >::fine_tune = true |
Whether to perform fine-tuning. This can be disabled to improve speed at the cost of accuracy.
| Float_ singlepp::ClassifyIntegratedOptions< Float_ >::fine_tune_threshold = 0.05 |
Score threshold to use to select the top-scoring subset of references during fine-tuning, see ClassifySingleOptions::fine_tune for more details.
| int singlepp::ClassifyIntegratedOptions< Float_ >::num_threads = 1 |
Number of threads to use. The parallelization scheme is determined by tatami::parallelize().
| Float_ singlepp::ClassifyIntegratedOptions< Float_ >::quantile = 0.8 |
Quantile to use to compute a per-reference score from the correlations. This has the same interpretation as ClassifySingleOptions::quantile.