singler_classic_markers
Classic marker detection for SingleR
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choose.hpp File Reference

Choose markers with the classic SingleR algorithm. More...

Go to the source code of this file.

Classes

struct  singler_classic_markers::ChooseOptions
 Options for choose(). More...
 

Namespaces

namespace  singler_classic_markers
 Implementation of the classic SingleR marker detection.
 

Functions

template<typename Stat_ = double, typename Value_ , typename Index_ , typename Label_ >
std::vector< std::vector< std::vector< std::pair< Index_, Stat_ > > > > singler_classic_markers::choose (const tatami::Matrix< Value_, Index_ > &matrix, const Label_ *label, const ChooseOptions &options)
 
template<typename Stat_ = double, typename Value_ , typename Index_ , typename Label_ >
std::vector< std::vector< std::vector< Index_ > > > singler_classic_markers::choose_index (const tatami::Matrix< Value_, Index_ > &matrix, const Label_ *label, const ChooseOptions &options)
 

Detailed Description

Choose markers with the classic SingleR algorithm.